Data DOI: 10.15785/SBGRID/101 | ID: 101
Publication DOI: 10.1371/journal.pone.0034354
3U69 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: 19 May 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/101
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/101 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/101 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/101 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/101 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 101 ; shasum -c files.sha'
Storage requirements: 1.5G
Biological Sample:
Unliganded wild-type human thrombin
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ESRF beamline ID14-1
Data Creation Date:
29 Jun 2009
Related Datasets:
Pereira, PJB. 2015. "X-Ray Diffraction data for: Unliganded wild-type human thrombin. PDB Code 3U69", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/101.
Native dataset, high resolution pass
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro JB Pereira | Data Collector, Depositor | IBMC - Instituto de Biologia Molecular e Celular, Porto, Portugal |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9334
Sweep:
SWEEP1
Files:
/programs/datagrid/101/tc1e_1_###.img
Images:
1 - 180
Beam:
(104.92, 103.61) -> (104.92, 103.47)
Distance:
141.36 -> 141.35
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.32 | 3.58 | 1.32 |
| Low resolution limit | 33.45 | 33.46 | 1.34 |
| Completeness | 84.4 | 97.0 | 36.9 |
| Multiplicity | 7.3 | 6.7 | 6.3 |
| I/sigma | 18.7 | 56.8 | 0.9 |
| Rmerge | 0.049 | 0.021 | 1.68 |
| CC half | 0.999 | 0.999 | 0.34 |
| Anomalous completeness | 84.2 | 97.2 | 36.3 |
| Anomalous multiplicity | 3.8 | 3.8 | 3.8 |
| Cell | 57.62 | 73.07 | 83.11 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9334
Sweep:
SWEEP1
Files:
/programs/datagrid/101/tc1e_1_###.img
Images:
1 - 180
Beam:
(104.92, 103.61) -> (104.92, 103.47)
Distance:
141.36 -> 141.28
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.32 | 3.58 | 1.32 |
| Low resolution limit | 33.45 | 33.46 | 1.34 |
| Completeness | 84.4 | 97.0 | 36.9 |
| Multiplicity | 7.3 | 6.7 | 6.3 |
| I/sigma | 18.7 | 56.8 | 0.9 |
| Rmerge | 0.049 | 0.021 | 1.68 |
| CC half | 0.999 | 0.999 | 0.338 |
| Anomalous completeness | 84.2 | 97.2 | 36.3 |
| Anomalous multiplicity | 3.8 | 3.8 | 3.8 |
| Cell | 57.62 | 73.07 | 83.11 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9334
Sweep:
SWEEP1
Files:
/programs/datagrid/101/tc1e_1_###.img
Images:
1 - 180
Beam:
(104.92, 103.61) -> (104.92, 103.48)
Distance:
141.36 -> 141.48
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.31 | 3.56 | 1.31 |
| Low resolution limit | 54.98 | 55.03 | 1.33 |
| Completeness | 83.6 | 99.5 | 34.4 |
| Multiplicity | 7.4 | 6.9 | 6.2 |
| I/sigma | 17.8 | 70.6 | 0.6 |
| Rmerge | 0.058 | 0.032 | 1.918 |
| CC half | 0.998 | 0.996 | 0.275 |
| Anomalous completeness | 83.4 | 99.9 | 33.8 |
| Anomalous multiplicity | 3.9 | 3.9 | 3.9 |
| Cell | 57.735 | 73.221 | 83.264 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
