Data DOI: 10.15785/SBGRID/1 | ID: 1
Publication DOI: 10.1016/j.cell.2011.10.020
3TS2 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Sliz Laboratory, Harvard Medical School
Release Date: April 10, 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/1
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/1 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/1 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/1 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/1 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 1 ; shasum -c files.sha'
Storage requirements: 1.6G
Biological Sample:
Lin28A/let-7g microRNA complex
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein, RNA
Collection Facility:
APS 24-ID-C
Data Creation Date:
Feb. 23, 2011
Related Datasets:
None
Nam, Y; Sliz, P. 2015. "X-Ray Diffraction data for: Lin28A/let-7g microRNA complex. PDB Code 3TS2", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/1.
Native Dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Yunsun Nam | Data Collector | Harvard Medical School |
| Piotr Sliz | Depositor, PI | Harvard Medical School |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97949
Sweep:
SWEEP1
Files:
/programs/datagrid/1/p3_6_1_###.img
Images:
1 - 90
Beam:
(157.69, 156.47) -> (157.69, 156.54)
Distance:
300.0 -> 301.43
Spacegroup:
C 2 2 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.89 | 5.13 | 1.89 |
| Low resolution limit | 52.23 | 52.25 | 1.92 |
| Completeness | 91.8 | 93.8 | 66.3 |
| Multiplicity | 3.0 | 3.3 | 2.1 |
| I/sigma | 7.8 | 14.0 | 1.0 |
| Rmerge | 0.045 | 0.036 | 1.364 |
| CC half | 0.996 | 0.991 | 0.392 |
| Anomalous completeness | 80.0 | 90.2 | 41.6 |
| Anomalous multiplicity | 1.7 | 1.7 | 1.7 |
| Cell | 45.98 | 108.991 | 182.848 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97949
Sweep:
SWEEP1
Files:
/programs/datagrid/1/p3_6_1_###.img
Images:
1 - 90
Beam:
(157.69, 156.47) -> (157.69, 156.48)
Distance:
300.0 -> 301.52
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.03 | 5.51 | 2.03 |
| Low resolution limit | 42.4 | 42.41 | 2.07 |
| Completeness | 98.1 | 94.6 | 96.9 |
| Multiplicity | 3.6 | 3.5 | 3.3 |
| I/sigma | 8.3 | 16.2 | 1.2 |
| Rmerge | 0.052 | 0.024 | 1.189 |
| CC half | 0.998 | 0.997 | 0.717 |
| Anomalous completeness | 93.9 | 92.9 | 89.6 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 46.01 | 109.16 | 182.83 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97949
Sweep:
SWEEP1
Files:
/programs/datagrid/1/p3_6_1_###.img
Images:
1 - 90
Beam:
(157.69, 156.47) -> (157.69, 156.47)
Distance:
300.0 -> 301.64
Spacegroup:
C 2 2 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.92 | 5.21 | 1.92 |
| Low resolution limit | 42.4 | 42.41 | 1.95 |
| Completeness | 97.1 | 93.7 | 83.9 |
| Multiplicity | 3.4 | 3.4 | 2.4 |
| I/sigma | 14.5 | 33.4 | 1.0 |
| Rmerge | 0.039 | 0.023 | 1.102 |
| CC half | 0.998 | 0.996 | 0.41 |
| Anomalous completeness | 90.2 | 90.0 | 63.5 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 46.01 | 109.16 | 182.82 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97949
Sweep:
SWEEP1
Files:
/programs/datagrid/1/p3_6_1_###.img
Images:
1 - 90
Beam:
(157.69, 156.47) -> (157.69, 156.46)
Distance:
300.0 -> 302.64
Spacegroup:
C 2 2 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.81 | 7.23 | 2.81 |
| Low resolution limit | 13.35 | 13.35 | 2.86 |
| Completeness | 63.8 | 4.6 | 1.6 |
| Multiplicity | 3.1 | 1.1 | 1.0 |
| I/sigma | 21.1 | 22.2 | 8.7 |
| Rmerge | 0.036 | 0.0 | 0.0 |
| CC half | 0.997 | 1.0 | 0.0 |
| Anomalous completeness | 54.6 | 0.4 | 0.0 |
| Anomalous multiplicity | 1.8 | 1.8 | 1.8 |
| Cell | 46.015 | 109.196 | 182.848 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
