Data DOI: 10.15785/SBGRID/996 | ID: 996
7QCP Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: 28 Feb 2023
1. If this dataset is locally available, it should be accessable at /programs/datagrid/996
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/996 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/996 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/996 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/996 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 996 ; shasum -c files.sha'
Storage requirements: 22G
Biological Sample:
Mycobacterial glucosyl-3-phosphoglycerate synthase
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
ESRF ID29
Data Creation Date:
20 Jun 2013
Related Datasets:
None
Pereira, PJB. 2023. "X-Ray Diffraction data for: Mycobacterial glucosyl-3-phosphoglycerate synthase. PDB Code 7QCP", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/996.
X-Ray Diffraction data from M. hassiacum GpgS, source of 7QCP structure
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro JB Pereira | Data Collector, Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.96112
Sweep:
SWEEP1
Files:
/programs/datagrid/996/ab1285_2_####.cbf
Images:
1 - 3600
Beam:
(215.7, 211.63) -> (215.7, 212.04)
Distance:
163.54 -> 162.04
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.06 | 2.88 | 1.06 |
| Low resolution limit | 27.82 | 27.83 | 1.08 |
| Completeness | 100.0 | 100.0 | 99.2 |
| Multiplicity | 12.1 | 12.7 | 8.0 |
| I/sigma | 13.9 | 45.4 | 0.7 |
| Rmerge | 0.067 | 0.042 | 2.608 |
| CC half | 0.999 | 0.999 | 0.305 |
| Anomalous completeness | 99.9 | 100.0 | 98.6 |
| Anomalous multiplicity | 6.2 | 6.2 | 6.2 |
| Cell | 71.28 | 90.66 | 95.3 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.96112
Sweep:
SWEEP1
Files:
/programs/datagrid/996/ab1285_2_####.cbf
Images:
1 - 3600
Beam:
(215.7, 211.63) -> (215.7, 212.06)
Distance:
163.54 -> 162.06
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.08 | 2.93 | 1.08 |
| Low resolution limit | 57.03 | 57.11 | 1.1 |
| Completeness | 99.4 | 99.7 | 99.6 |
| Multiplicity | 6.3 | 6.7 | 4.9 |
| I/sigma | 11.0 | 34.8 | 0.8 |
| Rmerge | 0.057 | 0.037 | 1.567 |
| CC half | 0.999 | 0.998 | 0.345 |
| Anomalous completeness | 98.2 | 98.6 | 98.1 |
| Anomalous multiplicity | 3.2 | 3.2 | 3.2 |
| Cell | 71.22 | 95.23 | 90.58 | 90.0 | 90.08 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.96112
Sweep:
SWEEP1
Files:
/programs/datagrid/996/ab1285_2_####.cbf
Images:
1 - 3600
Beam:
(215.7, 211.63) -> (215.7, 212.04)
Distance:
163.54 -> 162.17
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.04 | 2.82 | 1.04 |
| Low resolution limit | 95.22 | 95.62 | 1.06 |
| Completeness | 99.7 | 100.0 | 94.5 |
| Multiplicity | 11.9 | 13.1 | 6.5 |
| I/sigma | 9.8 | 62.0 | 0.1 |
| Rmerge | 0.078 | 0.042 | 1.036 |
| CC half | 0.999 | 0.999 | 0.301 |
| Anomalous completeness | 99.5 | 100.0 | 92.3 |
| Anomalous multiplicity | 6.1 | 6.1 | 6.1 |
| Cell | 71.228 | 90.52 | 95.216 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
