Data DOI: 10.15785/SBGRID/914 | ID: 914
Publication DOI: 10.1038/s41586-022-05501-7
7N2O Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Garcia Laboratory, Stanford University
Release Date: 9 Dec 2022
1. If this dataset is locally available, it should be accessable at /programs/datagrid/914
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/914 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/914 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/914 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/914 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 914 ; shasum -c files.sha'
Storage requirements: 16G
Biological Sample:
AS4.2-YEIH-HLA*B27
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
beamline 12-2, SSRL
Data Creation Date:
28 Feb 2020
Related Datasets:
None
Jude, KM; Garcia, KC; Yang, X; Garcia, K. 2022. "X-Ray Diffraction data for: AS4.2-YEIH-HLA*B27. PDB Code 7N2O", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/914.
native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin M Jude | Data Collector, Depositor | HHMI/Stanford University |
| K C Garcia | HHMI/Stanford University | |
| Xinbo Yang | Stanford University | |
| K. Christopher Garcia | PI | Stanford University |
first 1800 frames were processed using XDS
Version:
version unreported
Reprocessing failed.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/914/1449-6_5_#####.cbf
Images:
1 - 2667
Beam:
(217.32, 211.82) -> (217.32, 211.83)
Distance:
500.0 -> 501.98
Spacegroup:
P 2 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.77 | 4.8 | 1.77 |
| Low resolution limit | 43.23 | 43.24 | 1.8 |
| Completeness | 63.0 | 99.8 | 2.2 |
| Multiplicity | 10.4 | 12.6 | 1.2 |
| I/sigma | 0.1 | 0.5 | 0.0 |
| Rmerge | 2.522 | 1.172 | 0.301 |
| CC half | 0.745 | 0.762 | -0.1 |
| Anomalous completeness | 60.6 | 99.5 | 0.5 |
| Anomalous multiplicity | 5.5 | 5.5 | 5.5 |
| Cell | 53.99 | 122.98 | 178.17 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97946
Sweep:
SWEEP1
Files:
/programs/datagrid/914/1449-6_5_#####.cbf
Images:
1 - 2667
Beam:
(217.32, 211.82) -> (217.32, 211.85)
Distance:
500.0 -> 498.32
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.42 | 6.55 | 2.42 |
| Low resolution limit | 42.3 | 42.3 | 2.46 |
| Completeness | 100.0 | 100.0 | 99.7 |
| Multiplicity | 14.6 | 13.3 | 15.2 |
| I/sigma | 2.6 | 11.9 | 0.2 |
| Rmerge | 0.414 | 0.157 | 7.025 |
| CC half | 0.982 | 0.992 | 0.309 |
| Anomalous completeness | 100.0 | 100.0 | 99.6 |
| Anomalous multiplicity | 7.7 | 7.7 | 7.7 |
| Cell | 54.764 | 95.789 | 180.336 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
