Data DOI: 10.15785/SBGRID/794 | ID: 794
Publication DOI: 10.7554/eLife.62261
6XF9 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Glaunsinger Laboratory, University of California, Berkeley
Release Date: 19 Feb 2021
1. If this dataset is locally available, it should be accessable at /programs/datagrid/794
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/794 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/794 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/794 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/794 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 794 ; shasum -c files.sha'
Storage requirements: 4.2G
Biological Sample:
KSHV ORF68
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
Beamline 8.3.1, ALS, Berkeley, CA
Data Creation Date:
28 Sep 2018
Related Datasets:
None
Didychuk, AL; Glaunsinger, B. 2021. "X-Ray Diffraction data for: KSHV ORF68. PDB Code 6XF9", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/794.
Native data set
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Allison L Didychuk | Data Collector, Depositor | Glaunsinger Lab, University of California-Berkeley |
| Britt Glaunsinger | PI | University of California, Berkeley |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.11589
Sweep:
SWEEP1
Files:
/programs/datagrid/794/run4_1_#####.cbf
Images:
1 - 720
Beam:
(215.27, 211.4) -> (215.27, 211.32)
Distance:
400.0 -> 400.4
Spacegroup:
C 2 2 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.46 | 6.68 | 2.46 |
| Low resolution limit | 96.8 | 96.87 | 2.5 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 13.4 | 12.7 | 13.7 |
| I/sigma | 15.9 | 57.6 | 0.8 |
| Rmerge | 0.102 | 0.032 | 4.398 |
| CC half | 0.999 | 1.0 | 0.346 |
| Anomalous completeness | 100.0 | 100.0 | 99.9 |
| Anomalous multiplicity | 6.9 | 6.9 | 6.9 |
| Cell | 135.0 | 224.06 | 192.29 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.11589
Sweep:
SWEEP1
Files:
/programs/datagrid/794/run4_1_#####.cbf
Images:
1 - 720
Beam:
(215.27, 211.4) -> (215.27, 211.32)
Distance:
400.0 -> 400.28
Spacegroup:
C 2 2 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.46 | 6.68 | 2.46 |
| Low resolution limit | 115.63 | 115.76 | 2.5 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 13.4 | 12.7 | 13.7 |
| I/sigma | 15.9 | 57.5 | 0.8 |
| Rmerge | 0.102 | 0.032 | 4.425 |
| CC half | 0.999 | 0.999 | 0.342 |
| Anomalous completeness | 100.0 | 100.0 | 99.9 |
| Anomalous multiplicity | 6.9 | 6.9 | 6.9 |
| Cell | 135.0 | 224.06 | 192.29 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.11589
Sweep:
SWEEP1
Files:
/programs/datagrid/794/run4_1_#####.cbf
Images:
1 - 720
Beam:
(215.27, 211.4) -> (215.27, 211.32)
Distance:
400.0 -> 400.41
Spacegroup:
C 2 2 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.31 | 6.27 | 2.31 |
| Low resolution limit | 65.46 | 65.49 | 2.35 |
| Completeness | 100.0 | 100.0 | 99.5 |
| Multiplicity | 13.4 | 13.2 | 13.9 |
| I/sigma | 7.6 | 53.8 | 0.1 |
| Rmerge | 0.124 | 0.04 | 7.113 |
| CC half | 0.999 | 0.999 | 0.363 |
| Anomalous completeness | 100.0 | 100.0 | 99.5 |
| Anomalous multiplicity | 6.9 | 6.9 | 6.9 |
| Cell | 135.27 | 224.423 | 192.565 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
