Data DOI: 10.15785/SBGRID/767 | ID: 767
Publication DOI: 10.1016/j.molcel.2020.10.042
6VZE Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Rapoport Laboratory, Harvard Medical School
Release Date: 17 Nov 2020
1. If this dataset is locally available, it should be accessable at /programs/datagrid/767
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/767 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/767 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/767 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/767 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 767 ; shasum -c files.sha'
Storage requirements: 5.3G
Biological Sample:
Mouse surfactant protein B, C-terminal domain, crystallized at low pH
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24-ID-C
Data Creation Date:
16 Nov 2017
Related Datasets:
None
Bodnar, NO; Rapoport, TA. 2020. "X-Ray Diffraction data for: Mouse surfactant protein B, C-terminal domain, crystallized at low pH. PDB Code 6VZE", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/767.
Native dataset, collected at 0.979 angstroms
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Nicholas O Bodnar | Data Collector, Depositor | HMS |
| Tom A Rapoport | HMS | |
| Tom Rapoport | PI | Harvard Medical School |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9791
Sweep:
SWEEP1
Files:
/programs/datagrid/767/puck3_sample1_1_####.cbf
Images:
1 - 900
Beam:
(216.79, 223.02) -> (216.79, 222.92)
Distance:
360.0 -> 361.3
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.18 | 5.91 | 2.18 |
| Low resolution limit | 34.7 | 34.7 | 2.22 |
| Completeness | 97.7 | 98.2 | 96.6 |
| Multiplicity | 3.1 | 3.4 | 2.7 |
| I/sigma | 1.7 | 3.3 | 0.4 |
| Rmerge | 0.261 | 0.192 | 1.282 |
| CC half | 0.85 | 0.907 | 0.28 |
| Anomalous completeness | 87.9 | 94.4 | 81.3 |
| Anomalous multiplicity | 1.6 | 1.6 | 1.6 |
| Cell | 66.96 | 79.35 | 76.936 | 90.0 | 114.724 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9791
Sweep:
SWEEP1
Files:
/programs/datagrid/767/puck3_sample1_1_####.cbf
Images:
1 - 900
Beam:
(216.79, 223.02) -> (216.79, 223.14)
Distance:
360.0 -> 364.28
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.96 | 5.32 | 1.96 |
| Low resolution limit | 71.93 | 71.98 | 1.99 |
| Completeness | 97.1 | 92.9 | 98.0 |
| Multiplicity | 3.3 | 3.2 | 3.4 |
| I/sigma | 5.8 | 16.7 | 0.6 |
| Rmerge | 0.083 | 0.034 | 1.974 |
| CC half | 0.996 | 0.997 | 0.295 |
| Anomalous completeness | 88.1 | 79.4 | 92.1 |
| Anomalous multiplicity | 1.8 | 1.8 | 1.8 |
| Cell | 75.98 | 78.98 | 100.05 | 90.0 | 108.78 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9791
Sweep:
SWEEP1
Files:
/programs/datagrid/767/puck3_sample1_1_####.cbf
Images:
1 - 900
Beam:
(216.79, 223.02) -> (216.79, 223.14)
Distance:
360.0 -> 360.26
Spacegroup:
P 1 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.87 | 5.07 | 1.87 |
| Low resolution limit | 68.9 | 68.95 | 1.9 |
| Completeness | 98.3 | 98.7 | 97.4 |
| Multiplicity | 3.4 | 3.5 | 3.5 |
| I/sigma | 7.9 | 31.4 | 0.5 |
| Rmerge | 0.106 | 0.04 | 1.229 |
| CC half | 0.978 | 0.996 | 0.051 |
| Anomalous completeness | 93.5 | 96.0 | 90.3 |
| Anomalous multiplicity | 1.8 | 1.8 | 1.8 |
| Cell | 52.14 | 78.938 | 71.83 | 90.0 | 106.416 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
