Data DOI: 10.15785/SBGRID/740 | ID: 740
Publication DOI: 10.1016/j.chembiol.2020.10.002
6TKJ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: 27 Oct 2020
1. If this dataset is locally available, it should be accessable at /programs/datagrid/740
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/740 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/740 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/740 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/740 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 740 ; shasum -c files.sha'
Storage requirements: 14G
Biological Sample:
Human thrombin:tsetse thrombin inhibitor complex
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
ESRF ID23EH1
Data Creation Date:
2 Sep 2015
Related Datasets:
None
Calisto, BM; Pereira, PJB. 2020. "X-Ray Diffraction data for: Human thrombin:tsetse thrombin inhibitor complex. PDB Code 6TKJ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/740.
X-Ray Diffraction data from human thrombin:sulfated TTI complex, source of 6TKJ structure
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro JB Pereira | Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Barbara M Calisto | Data Collector | ALBA Synchrotron |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.7712
Sweep:
SWEEP1
Files:
/programs/datagrid/740/TB_TTI41_w1_1_####.cbf
Images:
1 - 2400
Beam:
(216.73, 209.03) -> (216.73, 208.72)
Distance:
247.98 -> 247.45
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.45 | 6.65 | 2.45 |
| Low resolution limit | 81.32 | 81.37 | 2.49 |
| Completeness | 100.0 | 100.0 | 98.7 |
| Multiplicity | 24.4 | 21.6 | 18.8 |
| I/sigma | 18.5 | 54.7 | 0.6 |
| Rmerge | 0.123 | 0.048 | 5.589 |
| CC half | 0.999 | 0.999 | 0.338 |
| Anomalous completeness | 99.9 | 100.0 | 99.1 |
| Anomalous multiplicity | 13.2 | 13.2 | 13.2 |
| Cell | 115.01 | 115.01 | 62.53 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.7712
Sweep:
SWEEP1
Files:
/programs/datagrid/740/TB_TTI41_w1_1_####.cbf
Images:
1 - 2400
Beam:
(216.73, 209.03) -> (216.73, 208.73)
Distance:
247.98 -> 247.54
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.45 | 6.65 | 2.45 |
| Low resolution limit | 81.32 | 81.37 | 2.49 |
| Completeness | 100.0 | 100.0 | 98.7 |
| Multiplicity | 24.4 | 21.6 | 18.8 |
| I/sigma | 18.5 | 54.8 | 0.6 |
| Rmerge | 0.123 | 0.048 | 5.582 |
| CC half | 0.999 | 0.999 | 0.285 |
| Anomalous completeness | 99.9 | 100.0 | 99.1 |
| Anomalous multiplicity | 13.2 | 13.2 | 13.2 |
| Cell | 115.01 | 115.01 | 62.53 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.7712
Sweep:
SWEEP1
Files:
/programs/datagrid/740/TB_TTI41_w1_1_####.cbf
Images:
1 - 2400
Beam:
(216.73, 209.03) -> (216.73, 208.72)
Distance:
247.98 -> 247.77
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.36 | 6.41 | 2.36 |
| Low resolution limit | 114.96 | 115.1 | 2.4 |
| Completeness | 99.7 | 100.0 | 92.1 |
| Multiplicity | 23.5 | 23.4 | 13.5 |
| I/sigma | 7.7 | 42.5 | 0.1 |
| Rmerge | 0.15 | 0.062 | 10.036 |
| CC half | 0.998 | 0.998 | 0.213 |
| Anomalous completeness | 99.4 | 100.0 | 91.9 |
| Anomalous multiplicity | 12.7 | 12.7 | 12.7 |
| Cell | 114.96 | 114.96 | 62.553 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
