Data DOI: 10.15785/SBGRID/694 | ID: 694
Publication DOI: 10.7554/eLife.53672
6NQZ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Buschiazzo Laboratory, Institut Pasteur de Montevideo
Release Date: 13 Mar 2020
1. If this dataset is locally available, it should be accessable at /programs/datagrid/694
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/694 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/694 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/694 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/694 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 694 ; shasum -c files.sha'
Storage requirements: 3.1G
Biological Sample:
Leptospira interrogans Flagellar-coiling protein B (FcpB)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
in house Micromax-007HF Cu rotating anode, Institut Pasteur de Montevideo, Uruguay
Data Creation Date:
24 Apr 2012
Related Datasets:
Buschiazzo, A. 2020. "X-Ray Diffraction data for: Leptospira interrogans Flagellar-coiling protein B (FcpB). PDB Code 6NQZ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/694.
iodide + magic triangle soaking, SAD data set (@1.5418 angstroms wavelength) These data were used to solve the structure by direct methods using the iodine atoms as anomalous scatterers (but not for final refinement, for which a separate data set has been used and deposited)
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Alejandro Buschiazzo | Data Collector, Depositor, PI | Institut Pasteur de Montevideo |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP1
Files:
/programs/datagrid/694/FCP2_6_A3_x3_set_###.mar2300
Images:
1 - 900
Beam:
(172.5, 172.5) -> (172.5, 172.6)
Distance:
300.0 -> 299.56
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.01 | 8.15 | 3.01 |
| Low resolution limit | 36.58 | 36.58 | 3.07 |
| Completeness | 100.0 | 100.0 | 96.7 |
| Multiplicity | 17.6 | 15.4 | 15.4 |
| I/sigma | 21.7 | 44.4 | 7.9 |
| Rmerge | 0.137 | 0.044 | 0.373 |
| CC half | 0.998 | 0.999 | 0.946 |
| Anomalous completeness | 99.7 | 100.0 | 93.7 |
| Anomalous multiplicity | 9.6 | 9.6 | 9.6 |
| Cell | 60.49 | 64.12 | 131.64 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP1
Files:
/programs/datagrid/694/FCP2_6_A3_x3_set_###.mar2300
Images:
1 - 900
Beam:
(172.5, 172.5) -> (172.5, 172.57)
Distance:
300.0 -> 299.58
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.01 | 8.16 | 3.01 |
| Low resolution limit | 41.73 | 41.73 | 3.07 |
| Completeness | 100.0 | 100.0 | 96.6 |
| Multiplicity | 17.6 | 15.4 | 15.5 |
| I/sigma | 21.8 | 44.6 | 7.9 |
| Rmerge | 0.137 | 0.043 | 0.373 |
| CC half | 0.998 | 1.0 | 0.952 |
| Anomalous completeness | 99.7 | 100.0 | 93.9 |
| Anomalous multiplicity | 9.6 | 9.6 | 9.6 |
| Cell | 60.49 | 64.12 | 131.64 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP1
Files:
/programs/datagrid/694/FCP2_6_A3_x3_set_###.mar2300
Images:
1 - 900
Beam:
(172.5, 172.5) -> (172.5, 172.54)
Distance:
300.0 -> 300.05
Spacegroup:
P 2 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.48 | 6.73 | 2.48 |
| Low resolution limit | 60.46 | 60.48 | 2.52 |
| Completeness | 88.4 | 100.0 | 50.7 |
| Multiplicity | 14.4 | 16.4 | 6.2 |
| I/sigma | 13.4 | 28.6 | 0.0 |
| Rmerge | 0.161 | 0.075 | -0.16 |
| CC half | 0.949 | 0.998 | 0.41 |
| Anomalous completeness | 88.7 | 100.0 | 53.7 |
| Anomalous multiplicity | 7.7 | 7.7 | 7.7 |
| Cell | 60.46 | 64.075 | 131.53 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
