Data DOI: 10.15785/SBGRID/688 | ID: 688
Publication DOI: 10.1073/pnas.1818631116
6ON9 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Ozkan Laboratory, University of Chicago
Release Date: 6 Dec 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/688
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/688 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/688 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/688 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/688 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 688 ; shasum -c files.sha'
Storage requirements: 5.6G
Biological Sample:
C. elegans ZIG-8 IG1-RIG-5 IG1 heterodimer, tetragonal form
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
Beamline 24-ID-C, NE-CAT, APS, Chicago, IL
Data Creation Date:
27 Feb 2019
Related Datasets:
None
Cheng, S; Kurleto, JD; Ozkan, E. 2019. "X-Ray Diffraction data for: C. elegans ZIG-8 IG1-RIG-5 IG1 heterodimer, tetragonal form. PDB Code 6ON9", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/688.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Shouqiang Cheng | Data Collector | University of Chicago |
| Justyna D Kurleto | Data Collector | University of Chicago |
| Engin Ozkan | Data Collector, Depositor, PI | University of Chicago |
Data processed easily with parameters in the image header. Refined parameters for ORGX, ORGY and detector distance are 1299.7, 1278.7 and 400.92, respectively, post-processing.
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/688/A_14_1_####.cbf
Images:
1 - 950
Beam:
(217.05, 225.46) -> (217.05, 225.36)
Distance:
400.0 -> 402.7
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.93 | 5.24 | 1.93 |
| Low resolution limit | 45.63 | 45.65 | 1.96 |
| Completeness | 99.9 | 100.0 | 96.6 |
| Multiplicity | 12.2 | 12.1 | 8.2 |
| I/sigma | 8.7 | 22.3 | 0.7 |
| Rmerge | 0.154 | 0.081 | 3.991 |
| CC half | 0.997 | 0.997 | 0.332 |
| Anomalous completeness | 99.5 | 99.9 | 95.2 |
| Anomalous multiplicity | 6.5 | 6.5 | 6.5 |
| Cell | 80.06 | 80.06 | 166.62 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/688/A_14_1_####.cbf
Images:
1 - 950
Beam:
(217.05, 225.46) -> (217.05, 225.41)
Distance:
400.0 -> 402.2
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.93 | 5.24 | 1.93 |
| Low resolution limit | 57.73 | 57.76 | 1.96 |
| Completeness | 99.9 | 100.0 | 96.6 |
| Multiplicity | 12.3 | 12.1 | 8.4 |
| I/sigma | 8.5 | 21.7 | 0.7 |
| Rmerge | 0.157 | 0.083 | 3.747 |
| CC half | 0.997 | 0.997 | 0.332 |
| Anomalous completeness | 99.5 | 99.9 | 95.1 |
| Anomalous multiplicity | 6.6 | 6.6 | 6.6 |
| Cell | 80.07 | 80.07 | 166.64 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/688/A_14_1_####.cbf
Images:
1 - 950
Beam:
(217.05, 225.46) -> (217.05, 225.4)
Distance:
400.0 -> 401.96
Spacegroup:
P 41 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.85 | 5.01 | 1.85 |
| Low resolution limit | 83.47 | 83.56 | 1.88 |
| Completeness | 99.0 | 100.0 | 90.4 |
| Multiplicity | 12.5 | 12.3 | 7.5 |
| I/sigma | 2.2 | 10.9 | 0.0 |
| Rmerge | 0.268 | 0.154 | 30.64 |
| CC half | 0.987 | 0.991 | 0.177 |
| Anomalous completeness | 99.0 | 99.7 | 91.2 |
| Anomalous multiplicity | 6.7 | 6.7 | 6.7 |
| Cell | 80.226 | 80.226 | 166.94 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
