Data DOI: 10.15785/SBGRID/667 | ID: 667
6P7Q Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Corbett Laboratory, University of California, San Diego
Release Date: 20 Dec 2019
1. If this dataset is locally available, it should be accessable at /programs/datagrid/667
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/667 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/667 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/667 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/667 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 667 ; shasum -c files.sha'
Storage requirements: 7.7G
Biological Sample:
E. coli MS115-1 NucC, 5'-pApA bound form
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24ID-E
Data Creation Date:
1 Aug 2018
Related Datasets:
None
Ye, Q; Corbett, KD. 2019. "X-Ray Diffraction data for: E. coli MS115-1 NucC, 5'-pApA bound form. PDB Code 6P7Q", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/667.
450 frames, 0.2 degrees per frame
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Kevin D Corbett | Depositor | UC San Diego |
| Qiaozhen Ye | Data Collector | UC San Diego |
| Kevin Corbett | PI | University of California, San Diego |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/667/12_7_1_######.cbf
Images:
1 - 450
Beam:
(163.48, 154.43) -> (163.48, 154.45)
Distance:
200.0 -> 200.6
Spacegroup:
H 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.42 | 3.85 | 1.42 |
| Low resolution limit | 42.49 | 42.51 | 1.44 |
| Completeness | 99.0 | 96.1 | 93.9 |
| Multiplicity | 4.9 | 5.1 | 3.9 |
| I/sigma | 9.9 | 27.9 | 1.1 |
| Rmerge | 0.085 | 0.036 | 1.79 |
| CC half | 0.997 | 0.998 | 0.308 |
| Anomalous completeness | 95.7 | 92.7 | 86.1 |
| Anomalous multiplicity | 2.5 | 2.5 | 2.5 |
| Cell | 131.68 | 131.68 | 252.6 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/667/12_7_1_######.cbf
Images:
1 - 450
Beam:
(163.48, 154.43) -> (163.48, 154.44)
Distance:
200.0 -> 200.42
Spacegroup:
H 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.42 | 3.85 | 1.42 |
| Low resolution limit | 65.84 | 65.91 | 1.44 |
| Completeness | 99.0 | 96.1 | 93.9 |
| Multiplicity | 4.9 | 5.1 | 3.9 |
| I/sigma | 9.9 | 27.9 | 1.0 |
| Rmerge | 0.085 | 0.036 | 1.795 |
| CC half | 0.997 | 0.998 | 0.3 |
| Anomalous completeness | 95.7 | 92.7 | 86.1 |
| Anomalous multiplicity | 2.5 | 2.5 | 2.5 |
| Cell | 131.68 | 131.68 | 252.6 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/667/12_7_1_######.cbf
Images:
1 - 450
Beam:
(163.48, 154.43) -> (163.48, 154.45)
Distance:
200.0 -> 200.77
Spacegroup:
R 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.3 | 3.53 | 1.3 |
| Low resolution limit | 55.67 | 55.72 | 1.32 |
| Completeness | 95.6 | 96.8 | 77.0 |
| Multiplicity | 4.6 | 5.2 | 1.9 |
| I/sigma | 8.5 | 54.6 | 0.2 |
| Rmerge | 0.081 | 0.038 | 0.894 |
| CC half | 0.998 | 0.996 | 0.277 |
| Anomalous completeness | 88.4 | 95.7 | 38.4 |
| Anomalous multiplicity | 2.4 | 2.4 | 2.4 |
| Cell | 131.796 | 131.796 | 252.649 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
