X-Ray Diffraction data from Chicken egg white lysozyme, source of 6RT1 structure

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Data DOI: 10.15785/SBGRID/654 | ID: 654

Publication DOI: 10.1039/D0CP02469D

6RT1 Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Pereira Laboratory, IBMC/i3S, Universidade do Porto

Release Date: 24 May 2019

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/654

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/654 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/654 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/654 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/654 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 654 ; shasum -c files.sha'

Storage requirements: 574M

Biological Sample:

Chicken egg white lysozyme

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

In-house data

Data Creation Date:

24 Jun 2007

Related Datasets:

None


Cite this Dataset

Pereira, PJB. 2019. "X-Ray Diffraction data for: Chicken egg white lysozyme. PDB Code 6RT1", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/654.

Download Citation

Dataset Description

Highly redundant dataset from Cu Ka home source

Project Members

Name Additional Roles Affiliation While Working on the Project
Pedro JB PereiraData Collector, DepositorIBMC - Instituto de Biologia Molecular e Celular
Pedro PereiraPIUniversidade do Porto

Reprocessing Instructions

XDS.INP templates included for the 13 wedges composing the dataset

Reprocessing Data

About Reprocessing

xia2 -2d

xia2 -3d

xia2 -3dii

xia2 -dials
/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3d /programs/datagrid//654/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3dii /programs/datagrid//654/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=dials /programs/datagrid//654/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.