Data DOI: 10.15785/SBGRID/648 | ID: 648
6O6O Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Buschiazzo Laboratory, Institut Pasteur de Montevideo
Release Date: 9 Jun 2020
1. If this dataset is locally available, it should be accessable at /programs/datagrid/648
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/648 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/648 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/648 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/648 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 648 ; shasum -c files.sha'
Storage requirements: 1.5G
Biological Sample:
FasR transcription factor from Mycobacterium tuberculosis
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
in house Micromax-007HF Cu rotating anode, Institut Pasteur de Montevideo, Uruguay
Data Creation Date:
26 Apr 2016
Related Datasets:
None
Buschiazzo, A. 2020. "X-Ray Diffraction data for: FasR transcription factor from Mycobacterium tuberculosis. PDB Code 6O6O", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/648.
Native data; the protein was not co-crystallized or soaked with any ligand, but turned out to contain myristic acid bound, coming from the expression system
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Alejandro Buschiazzo | Data Collector, Depositor, PI | Institut Pasteur de Montevideo |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP1
Files:
/programs/datagrid/648/20160419_FasR01_D4_X1_Set_###.mar2300
Images:
1 - 450
Beam:
(172.5, 172.5) -> (172.5, 172.35)
Distance:
100.0 -> 100.7
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.55 | 4.21 | 1.55 |
| Low resolution limit | 35.19 | 35.2 | 1.58 |
| Completeness | 97.2 | 92.5 | 89.4 |
| Multiplicity | 3.5 | 3.4 | 3.3 |
| I/sigma | 21.4 | 61.2 | 0.7 |
| Rmerge | 0.019 | 0.011 | 1.55 |
| CC half | 0.999 | 0.999 | 0.649 |
| Anomalous completeness | 92.2 | 89.8 | 79.9 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 86.18 | 100.24 | 38.55 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP1
Files:
/programs/datagrid/648/20160419_FasR01_D4_X1_Set_###.mar2300
Images:
1 - 450
Beam:
(172.5, 172.5) -> (172.5, 172.34)
Distance:
100.0 -> 100.65
Spacegroup:
P 21 21 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.55 | 4.21 | 1.55 |
| Low resolution limit | 35.18 | 35.19 | 1.58 |
| Completeness | 97.2 | 92.5 | 89.8 |
| Multiplicity | 3.5 | 3.4 | 3.3 |
| I/sigma | 21.5 | 61.6 | 0.7 |
| Rmerge | 0.019 | 0.011 | 1.543 |
| CC half | 0.999 | 0.999 | 0.635 |
| Anomalous completeness | 92.2 | 89.8 | 80.4 |
| Anomalous multiplicity | 1.9 | 1.9 | 1.9 |
| Cell | 86.18 | 100.24 | 38.54 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP1
Files:
/programs/datagrid/648/20160419_FasR01_D4_X1_Set_###.mar2300
Images:
1 - 450
Beam:
(172.5, 172.5) -> (172.5, 172.35)
Distance:
100.0 -> 100.7
Spacegroup:
P 2 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.48 | 4.02 | 1.48 |
| Low resolution limit | 36.03 | 36.04 | 1.51 |
| Completeness | 89.9 | 96.1 | 65.8 |
| Multiplicity | 3.3 | 3.4 | 2.3 |
| I/sigma | 12.8 | 27.8 | 0.0 |
| Rmerge | 0.06 | 0.04 | -0.161 |
| CC half | 0.987 | 0.988 | 0.225 |
| Anomalous completeness | 83.6 | 95.3 | 51.0 |
| Anomalous multiplicity | 1.8 | 1.8 | 1.8 |
| Cell | 38.603 | 86.313 | 100.381 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
