X-Ray Diffraction data from EpoR complex with dimeric DARPin CCR5, source of 6MOI structure

Data DOI: 10.15785/SBGRID/621 | ID: 621

6MOI Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Garcia Laboratory, Stanford University

Release Date: 24 May 2019

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/621

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/621 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/621 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/621 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/621 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 621 ; shasum -c files.sha'

Storage requirements: 11G

Biological Sample:

EpoR complex with dimeric DARPin CCR5

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ALS 5.0.1

Data Creation Date:

7 Feb 2018

Related Datasets:

None


Cite this Dataset

Jude, KM; Garcia, KC; Guo, Y; Mohan, K; Garcia, K. 2019. "X-Ray Diffraction data for: EpoR complex with dimeric DARPin CCR5. PDB Code 6MOI", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/621.

Download Citation

Dataset Description

Native Dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Kevin M JudeData Collector, DepositorStanford University/Howard Hughes Medical Institute
K C GarciaStanford University, Howard Hughes Medical Institute
Yu GuoNankai University
Kritika MohanStanford University
K. Christopher GarciaPIStanford University

Reprocessing Instructions

Data were processed in XDS

Reprocessing Data

About Reprocessing

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97741

Sweep:

SWEEP1

Files:

/programs/datagrid/621/1449-13_6_#####.cbf

Images:

1 - 1800

Beam:

(223.94, 237.53) -> (223.94, 237.18)

Distance:

450.0 -> 448.61

Spacegroup:

P 61 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.36 6.4 2.36
Low resolution limit 43.46 43.47 2.4
Completeness 100.0 100.0 99.9
Multiplicity 39.0 34.8 38.9
I/sigma 14.0 65.1 0.1
Rmerge 0.264 0.046 15.054
CC half 0.999 1.0 0.345
Anomalous completeness 99.8 100.0 99.4
Anomalous multiplicity 21.0 21.0 21.0
Cell 113.22 113.22 281.78 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97741

Sweep:

SWEEP1

Files:

/programs/datagrid/621/1449-13_6_#####.cbf

Images:

1 - 1800

Beam:

(223.94, 237.53) -> (223.94, 237.17)

Distance:

450.0 -> 449.27

Spacegroup:

P 61 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.36 6.41 2.36
Low resolution limit 80.48 80.53 2.4
Completeness 100.0 100.0 99.9
Multiplicity 38.9 34.7 38.9
I/sigma 14.0 65.1 0.1
Rmerge 0.262 0.045 14.99
CC half 0.999 1.0 0.305
Anomalous completeness 99.8 100.0 99.4
Anomalous multiplicity 21.0 21.0 21.0
Cell 113.22 113.22 281.78 90.0 90.0 120.0

Version:

version unreported

Project:

AUTOMATIC

Crystal:

DEFAULT

Sequence Length:

0

Wavelength:

SAD - 0.97741

Sweep:

SWEEP1

Files:

/programs/datagrid/621/1449-13_6_#####.cbf

Images:

1 - 1800

Beam:

(223.94, 237.53) -> (223.94, 237.18)

Distance:

450.0 -> 451.52

Spacegroup:

P 61 2 2

For AUTOMATIC/DEFAULT/SAD:

ALL LOW HIGH
High resolution limit 2.29 6.22 2.29
Low resolution limit 97.67 97.76 2.33
Completeness 100.0 100.0 98.4
Multiplicity 38.4 34.6 38.7
I/sigma 8.8 53.3 0.1
Rmerge 0.274 0.058 30.714
CC half 0.999 0.999 0.291
Anomalous completeness 99.9 100.0 98.3
Anomalous multiplicity 20.7 20.7 20.7
Cell 112.777 112.777 280.961 90.0 90.0 120.0

License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.