X-Ray Diffraction data from Human metavinculin tail domain in complex with PIP2, source of 5L0C structure

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Data DOI: 10.15785/SBGRID/559 | ID: 559

Publication DOI: 10.1073/pnas.1600702113

5L0C Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Tina Laboratory, The Scripps Research Institute

Release Date: 26 Jan 2018

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/559

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/559 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/559 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/559 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/559 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 559 ; shasum -c files.sha'

Storage requirements: 12G

Biological Sample:

Human metavinculin tail domain in complex with PIP2

Dataset Type:

X-Ray Diffraction

Subject Composition:

Ligand, Protein

Collection Facility:

22ID APS, Chicago, IL

Data Creation Date:

29 Jun 2012

Related Datasets:

None


Cite this Dataset

Chinthalapudi, K; Izard, T. 2018. "X-Ray Diffraction data for: Human metavinculin tail domain in complex with PIP2. PDB Code 5L0C", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/559.

Download Citation

Dataset Description

Native Dataset,

Project Members

Name Additional Roles Affiliation While Working on the Project
Krishna ChinthalapudiData Collector, DepositorDepositor
Tina IzardPrincipal Investigator
Tina IzardPIThe Scripps Research Institute

Reprocessing Instructions

Autoproc is used to process the data. This dataset was indexed in Space Group: C 1 2 1

Reprocessing Data

About Reprocessing

xia2 -2d

xia2 -3d

xia2 -3dii

xia2 -dials
/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3d read_all_image_headers=False reverse_phi=True /programs/datagrid//559/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3dii read_all_image_headers=False reverse_phi=True /programs/datagrid//559/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=dials read_all_image_headers=False reverse_phi=True /programs/datagrid//559/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.