Data DOI: 10.15785/SBGRID/490 | ID: 490
Publication DOI: 10.1126/scitranslmed.aaj1928
5UDE Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
McLellan Laboratory, University of Texas at Austin
Release Date: 22 Aug 2017
1. If this dataset is locally available, it should be accessable at /programs/datagrid/490
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/490 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/490 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/490 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/490 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 490 ; shasum -c files.sha'
Storage requirements: 901M
Biological Sample:
RSV F B9320 DS-Cav1
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
19-ID, SBC, APS, Chicago, IL
Data Creation Date:
20 Jul 2014
Related Datasets:
None
McLellan, JS. 2017. "X-Ray Diffraction data for: RSV F B9320 DS-Cav1. PDB Code 5UDE", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/490.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Jason S McLellan | Data Collector, Depositor | Geisel School of Medicine at Dartmouth |
| Jason McLellan | PI | University of Texas at Austin |
Beam center, as defined in the header, needs to be corrected to X=153.1 Y=162.5 Processing with iMosflm will require "Reverse direction of spindle rotation" to be checked
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/490/9320_MEDI_P2P8.####.img
Images:
1 - 50
Beam:
(154.5, 159.98) -> (154.5, 162.51)
Distance:
463.28 -> 464.73
Spacegroup:
P 43 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.96 | 8.02 | 2.96 |
| Low resolution limit | 41.34 | 41.34 | 3.01 |
| Completeness | 99.5 | 96.0 | 100.0 |
| Multiplicity | 5.8 | 5.3 | 5.1 |
| I/sigma | 8.4 | 24.5 | 1.0 |
| Rmerge | 0.183 | 0.042 | 1.704 |
| CC half | 0.992 | 0.997 | 0.274 |
| Anomalous completeness | 94.9 | 91.6 | 97.0 |
| Anomalous multiplicity | 3.3 | 3.3 | 3.3 |
| Cell | 170.44 | 170.44 | 170.44 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/490/9320_MEDI_P2P8.####.img
Images:
1 - 50
Beam:
(154.5, 159.98) -> (154.5, 162.51)
Distance:
463.28 -> 464.93
Spacegroup:
P 43 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.96 | 8.03 | 2.96 |
| Low resolution limit | 53.9 | 53.91 | 3.01 |
| Completeness | 99.4 | 95.9 | 100.0 |
| Multiplicity | 5.8 | 5.3 | 5.1 |
| I/sigma | 8.4 | 24.5 | 1.0 |
| Rmerge | 0.183 | 0.042 | 1.7 |
| CC half | 0.992 | 0.997 | 0.277 |
| Anomalous completeness | 94.9 | 91.7 | 97.0 |
| Anomalous multiplicity | 3.3 | 3.3 | 3.3 |
| Cell | 170.44 | 170.44 | 170.44 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/490/9320_MEDI_P2P8.####.img
Images:
1 - 50
Beam:
(154.5, 159.98) -> (154.5, 162.51)
Distance:
463.28 -> 468.24
Spacegroup:
P 41 3 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 3.0 | 8.13 | 3.0 |
| Low resolution limit | 54.64 | 54.64 | 3.05 |
| Completeness | 99.5 | 96.5 | 100.0 |
| Multiplicity | 5.9 | 5.4 | 5.2 |
| I/sigma | 7.3 | 31.2 | 0.5 |
| Rmerge | 0.202 | 0.053 | 2.26 |
| CC half | 0.977 | 0.965 | 0.257 |
| Anomalous completeness | 95.6 | 93.6 | 97.7 |
| Anomalous multiplicity | 3.3 | 3.3 | 3.3 |
| Cell | 172.773 | 172.773 | 172.773 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
