X-Ray Diffraction data from PilB from Geobacter metallireducens bound to ADP, source of 5TSG structure

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Data DOI: 10.15785/SBGRID/452 | ID: 452

Publication DOI: 10.1038/ncomms15091

5TSG Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Howell Laboratory, University of Toronto

Release Date: 13 Jun 2017

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/452

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/452 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/452 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/452 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/452 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 452 ; shasum -c files.sha'

Storage requirements: 15G

Biological Sample:

PilB from Geobacter metallireducens bound to ADP

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

beamline 08B1-1, CLS, SK, Canada

Data Creation Date:

16 Mar 2016

Related Datasets:

None


Cite this Dataset

McCallum, M; Howell, P; Howell, L. 2017. "X-Ray Diffraction data for: PilB from Geobacter metallireducens bound to ADP. PDB Code 5TSG", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/452.

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Dataset Description

Native Dataset

Project Members

Name Additional Roles Affiliation While Working on the Project
Matthew McCallumData Collector, DepositorHospital for Sick Children
P. Lynne HowellData CollectorHospital for Sick Children
Lynne HowellPIUniversity of Toronto

Reprocessing Instructions

Processed as P 32 2 1 in XDS to 3.3A, then elliptically truncated

Reprocessing Data

About Reprocessing

xia2 -2d

xia2 -3d

xia2 -3dii

xia2 -dials
/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3d /programs/datagrid//452/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3dii /programs/datagrid//452/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=dials /programs/datagrid//452/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.