Data DOI: 10.15785/SBGRID/407 | ID: 407
Publication DOI: 10.7554/eLife.21422
5IUM Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Buschiazzo Laboratory, Institut Pasteur de Montevideo
Release Date: 13 Dec 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/407
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/407 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/407 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/407 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/407 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 407 ; shasum -c files.sha'
Storage requirements: 938M
Biological Sample:
Phosphorylated DesKC (B. subtilis)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
Institut Pasteur de Montevideo Protein Crystallography Facility - RIGAKU MICROMAX-007 HF
Data Creation Date:
6 Mar 2009
Related Datasets:
None
Buschiazzo, A. 2016. "X-Ray Diffraction data for: Phosphorylated DesKC (B. subtilis). PDB Code 5IUM", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/407.
Native dataset
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Alejandro Buschiazzo | Data Collector, Depositor | institut Pasteur de Montevideo / Institut Pasteur |
| Alejandro Buschiazzo | PI | Institut Pasteur de Montevideo |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP1
Files:
/programs/datagrid/407/wtype-P_8_D1_2_###.mar2300
Images:
1 - 240
Beam:
(172.5, 172.5) -> (172.5, 172.49)
Distance:
270.0 -> 269.89
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.89 | 7.82 | 2.89 |
| Low resolution limit | 36.27 | 36.27 | 2.94 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 7.2 | 6.3 | 7.3 |
| I/sigma | 16.0 | 63.4 | 0.5 |
| Rmerge | 0.066 | 0.016 | 4.009 |
| CC half | 1.0 | 1.0 | 0.303 |
| Anomalous completeness | 99.7 | 99.5 | 99.8 |
| Anomalous multiplicity | 3.9 | 3.9 | 3.9 |
| Cell | 94.44 | 94.44 | 161.85 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP1
Files:
/programs/datagrid/407/wtype-P_8_D1_2_###.mar2300
Images:
1 - 240
Beam:
(172.5, 172.5) -> (172.5, 172.49)
Distance:
270.0 -> 270.05
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.91 | 7.89 | 2.91 |
| Low resolution limit | 45.33 | 45.34 | 2.96 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 7.2 | 6.2 | 7.3 |
| I/sigma | 16.1 | 61.9 | 0.5 |
| Rmerge | 0.066 | 0.017 | 3.873 |
| CC half | 1.0 | 1.0 | 0.344 |
| Anomalous completeness | 99.6 | 99.0 | 99.8 |
| Anomalous multiplicity | 3.8 | 3.8 | 3.8 |
| Cell | 94.44 | 94.44 | 161.85 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 1.54179
Sweep:
SWEEP1
Files:
/programs/datagrid/407/wtype-P_8_D1_2_###.mar2300
Images:
1 - 240
Beam:
(172.5, 172.5) -> (172.5, 172.47)
Distance:
270.0 -> 270.69
Spacegroup:
P 3 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.29 | 6.21 | 2.29 |
| Low resolution limit | 45.4 | 45.41 | 2.33 |
| Completeness | 81.9 | 98.5 | 43.5 |
| Multiplicity | 5.8 | 6.7 | 2.6 |
| I/sigma | 8.1 | 28.4 | 0.0 |
| Rmerge | 0.108 | 0.042 | -0.14 |
| CC half | 0.976 | 0.999 | 0.252 |
| Anomalous completeness | 79.4 | 99.0 | 39.4 |
| Anomalous multiplicity | 3.1 | 3.1 | 3.1 |
| Cell | 94.586 | 94.586 | 162.018 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
