X-Ray Diffraction data from methylglyoxal synthase, source of 5H3L structure

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Data DOI: 10.15785/SBGRID/387 | ID: 387

5H3L Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Murthy Laboratory, Indian Institute of Science

Release Date: 15 Nov 2016

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/387

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/387 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/387 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/387 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/387 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 387 ; shasum -c files.sha'

Storage requirements: 3.2G

Biological Sample:

methylglyoxal synthase

Dataset Type:

X-Ray Diffraction

Subject Composition:

Protein

Collection Facility:

ESRF BM14

Data Creation Date:

7 Aug 2016

Related Datasets:

None


Cite this Dataset

Hatti, K; Dadireddy, V; Murthy, M; S, R; Murthy, M. 2016. "X-Ray Diffraction data for: methylglyoxal synthase. PDB Code 5H3L", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/387.

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Dataset Description

Native dataset of a crystal which was obtained serendipitously. Now we know that the crystal corresponds to methylglyoxal synthase which was crystallised as a contaminant.

Project Members

Name Additional Roles Affiliation While Working on the Project
Kaushik HattiDepositorMolecular Biophysics Unit, Indian Institute of Science
Venkatareddy DadireddyData CollectorPhysics Department, Indian Institute of Science
MRN MurthyMolecular Biophysics Unit, Indian Institute of Science
Ramakumar SPhysics Department, Indian Institute of Science
M.R.N. MurthyPIIndian Institute of Science

Reprocessing Instructions

none

Reprocessing Data

About Reprocessing

xia2 -2d

xia2 -3d

xia2 -3dii

xia2 -dials
/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3d mosflm_beam_centre=142.0,147.70 read_all_image_headers=False /programs/datagrid//387/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3dii mosflm_beam_centre=142.0,147.70 read_all_image_headers=False /programs/datagrid//387/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=dials mosflm_beam_centre=142.0,147.70 read_all_image_headers=False /programs/datagrid//387/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.