X-Ray Diffraction data from Calmodulin in complex with a peptide from the murine anion exchanger slc26a3, source of 5DOW structure

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Data DOI: 10.15785/SBGRID/338 | ID: 338

5DOW Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB

Looger Laboratory, HHMI/Janelia Research Campus

Release Date: 29 Jul 2016

Data Access Instructions

1. If this dataset is locally available, it should be accessable at /programs/datagrid/338

2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:

'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/338 .' (Harvard Medical School, USA)

Depending on your location, faster access may be available from a Tier 1 site closer to your location

'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/338 .' (Uppsala University, Sweden)

'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/338 .' (Institut Pasteur de Montevideo, Uruguay)

'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/338 .' (Shanghai Institutes for Biological Sciences, China)

3. After the transfer is completed, please issue the following command to verify data integrity:

'cd 338 ; shasum -c files.sha'

Storage requirements: 9.6G

Biological Sample:

Calmodulin in complex with a peptide from the murine anion exchanger slc26a3

Dataset Type:

X-Ray Diffraction

Subject Composition:

Ligand, Protein

Collection Facility:

Home source: Rigaku Varimax and Saturn detector, 100 K

Data Creation Date:

26 Jan 2015

Related Datasets:

None


Cite this Dataset

Keller, JP; Loren, L. 2016. "X-Ray Diffraction data for: Calmodulin in complex with a peptide from the murine anion exchanger slc26a3. PDB Code 5DOW", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/338.

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Dataset Description

These are twinned datasets which were successfully merged together and solved with MR-SAD.

Project Members

Name Additional Roles Affiliation While Working on the Project
Jacob P KellerData Collector, DepositorHHMI Janelia Research Campus
Looger LorenPIHHMI/Janelia Research Campus

Reprocessing Instructions

Due to twinning, datasets appear in Pointless/Aimless to be PG 622. The final correct spacegroup was P3212. Twinning is also varied across the datasets due to changing irradiated area of the crystal (x-ray beam off-center from goniostat--see forthcoming publication.)

Reprocessing Data

About Reprocessing

xia2 -2d

xia2 -3d

xia2 -3dii

xia2 -dials
/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3d mosflm_beam_centre=46.92,45.14 /programs/datagrid//338/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=3dii mosflm_beam_centre=46.92,45.14 /programs/datagrid//338/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.

/programs/x86_64-linux/dials/3.12.0/bin.capsules//xia2 pipeline=dials mosflm_beam_centre=46.92,45.14 /programs/datagrid//338/ verbose=True multiprocessing.nproc=1 atom=X

Version:

version unreported

Reprocessing failed.


License and Terms of use

License: CC0

Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.