Data DOI: 10.15785/SBGRID/263 | ID: 263
Publication DOI: 10.1016/j.str.2016.03.002
5HQG Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Blacklow Laboratory, Harvard Medical School
Release Date: 24 May 2016
1. If this dataset is locally available, it should be accessable at /programs/datagrid/263
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/263 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/263 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/263 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/263 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 263 ; shasum -c files.sha'
Storage requirements: 2.7G
Biological Sample:
WD40 domain of Human E3 Ubiquitin Ligase COP1 (RFWD2)
Dataset Type:
X-Ray Diffraction
Subject Composition:
Protein
Collection Facility:
APS 24 ID C
Data Creation Date:
4 Dec 2014
Related Datasets:
None
Uljon, S; Xu, X; Blacklow, S. 2016. "X-Ray Diffraction data for: WD40 domain of Human E3 Ubiquitin Ligase COP1 (RFWD2) . PDB Code 5HQG", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/263.
single wavelength dataset of single crystal
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Sacha Uljon | Data Collector, Depositor | Brigham and Women's Hospital |
| Xiang Xu | HMS | |
| Stephen Blacklow | PI | Harvard Medical School |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/263/scb001_03base_1_####.cbf
Images:
1 - 450
Beam:
(216.86, 220.68) -> (216.86, 220.62)
Distance:
400.0 -> 401.1
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.8 | 4.88 | 1.8 |
| Low resolution limit | 35.76 | 35.77 | 1.83 |
| Completeness | 98.7 | 100.0 | 85.0 |
| Multiplicity | 4.4 | 4.4 | 2.4 |
| I/sigma | 13.7 | 48.6 | 0.4 |
| Rmerge | 0.037 | 0.017 | 1.315 |
| CC half | 1.0 | 1.0 | 0.216 |
| Anomalous completeness | 94.5 | 95.8 | 68.1 |
| Anomalous multiplicity | 2.4 | 2.4 | 2.4 |
| Cell | 68.96 | 68.96 | 133.96 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/263/scb001_03base_1_####.cbf
Images:
1 - 450
Beam:
(216.86, 220.68) -> (216.86, 220.61)
Distance:
400.0 -> 401.16
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.8 | 4.89 | 1.8 |
| Low resolution limit | 59.7 | 59.74 | 1.83 |
| Completeness | 98.7 | 99.9 | 85.1 |
| Multiplicity | 4.4 | 4.4 | 2.4 |
| I/sigma | 13.7 | 48.7 | 0.4 |
| Rmerge | 0.037 | 0.017 | 1.273 |
| CC half | 1.0 | 1.0 | 0.219 |
| Anomalous completeness | 94.5 | 95.8 | 67.7 |
| Anomalous multiplicity | 2.4 | 2.4 | 2.4 |
| Cell | 68.94 | 68.94 | 133.94 | 90.0 | 90.0 | 120.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.9792
Sweep:
SWEEP1
Files:
/programs/datagrid/263/scb001_03base_1_####.cbf
Images:
1 - 450
Beam:
(216.86, 220.68) -> (216.86, 220.62)
Distance:
400.0 -> 401.26
Spacegroup:
P 31 2 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.71 | 4.64 | 1.71 |
| Low resolution limit | 67.0 | 67.05 | 1.74 |
| Completeness | 95.0 | 100.0 | 63.2 |
| Multiplicity | 4.2 | 4.5 | 2.1 |
| I/sigma | 16.7 | 79.4 | 0.3 |
| Rmerge | 0.041 | 0.02 | 1.092 |
| CC half | 0.999 | 0.998 | 0.272 |
| Anomalous completeness | 88.7 | 98.4 | 41.5 |
| Anomalous multiplicity | 2.3 | 2.3 | 2.3 |
| Cell | 69.004 | 69.004 | 133.994 | 90.0 | 90.0 | 120.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
