Data DOI: 10.15785/SBGRID/158 | ID: 158
Publication DOI: 10.1073/pnas.1404639111
4LDJ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Westover Laboratory, UT Southwestern Medical Center
Release Date: 21 Aug 2015
1. If this dataset is locally available, it should be accessable at /programs/datagrid/158
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/158 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/158 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/158 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/158 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 158 ; shasum -c files.sha'
Storage requirements: 6.9G
Biological Sample:
Human GTPase KRAS G12C bound to GDP
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
APS Beamline 19-ID
Data Creation Date:
11 Apr 2013
Related Datasets:
None
Hunter, JC; Westover, KD; Westover, K. 2015. "X-Ray Diffraction data for: Human GTPase KRAS G12C bound to GDP. PDB Code 4LDJ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/158.
Diffraction Images from native data set collected from a crystal of GDP-bound G12C Oncogenic mutant of human GTPase KRAS
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| John C Hunter | Data Collector, Depositor | UT Southwestern Medical Center at Dallas |
| Kenneth D Westover | UT Southwestern Medical Center at Dallas | |
| Ken Westover | PI | UT Southwestern Medical Center |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/158/G12C_GDP.####.img
Images:
1 - 390
Beam:
(154.5, 159.98) -> (154.5, 161.8)
Distance:
145.1 -> 147.0
Spacegroup:
P 4 2 2
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.16 | 5.77 | 2.16 |
| Low resolution limit | 15.81 | 15.81 | 2.2 |
| Completeness | 99.2 | 97.6 | 100.0 |
| Multiplicity | 10.4 | 7.3 | 12.3 |
| I/sigma | 1.6 | 1.5 | 1.3 |
| Rmerge | 0.727 | 0.622 | 1.067 |
| CC half | 0.623 | 0.657 | 0.39 |
| Anomalous completeness | 95.8 | 85.2 | 96.2 |
| Anomalous multiplicity | 6.1 | 6.1 | 6.1 |
| Cell | 41.39 | 41.39 | 93.9 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/158/G12C_GDP.####.img
Images:
1 - 390
Beam:
(154.5, 159.98) -> (154.5, 162.5)
Distance:
145.1 -> 145.24
Spacegroup:
P 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.02 | 2.77 | 1.02 |
| Low resolution limit | 45.72 | 45.77 | 1.04 |
| Completeness | 68.4 | 97.7 | 2.4 |
| Multiplicity | 2.1 | 2.1 | 1.1 |
| I/sigma | 12.1 | 26.9 | 0.4 |
| Rmerge | 0.044 | 0.019 | 0.861 |
| CC half | 0.993 | 0.989 | 0.402 |
| Anomalous completeness | 50.6 | 91.1 | 0.0 |
| Anomalous multiplicity | 1.2 | 1.2 | 1.2 |
| Cell | 39.07 | 40.74 | 91.45 | 90.0 | 89.97 | 89.99 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97918
Sweep:
SWEEP1
Files:
/programs/datagrid/158/G12C_GDP.####.img
Images:
1 - 390
Beam:
(154.5, 159.98) -> (154.5, 162.49)
Distance:
145.1 -> 145.06
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.06 | 2.88 | 1.06 |
| Low resolution limit | 45.7 | 45.75 | 1.08 |
| Completeness | 94.8 | 100.0 | 53.3 |
| Multiplicity | 6.4 | 7.4 | 1.9 |
| I/sigma | 11.7 | 71.4 | 0.1 |
| Rmerge | 0.062 | 0.025 | 2.26 |
| CC half | 0.999 | 0.998 | 0.333 |
| Anomalous completeness | 88.6 | 100.0 | 23.5 |
| Anomalous multiplicity | 3.5 | 3.5 | 3.5 |
| Cell | 39.059 | 40.71 | 91.41 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
