Data DOI: 10.15785/SBGRID/1139 | ID: 1139
Bonvin Laboratory, Utrecht University
Release Date: 16 Feb 2025
1. If this dataset is locally available, it should be accessable at /programs/datagrid/1139
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/1139 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/1139 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/1139 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/1139 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 1139 ; shasum -c files.sha'
Storage requirements: 307G
Biological Sample:
HADDOCK docking antibody-antigen models using machine learning-predicted unbound structures
Dataset Type:
Structural Model
Subject Composition:
Protein
Collection Facility:
Utrecht University, Utrecht, the Netherlands
Data Creation Date:
7 Jan 2024
Related Datasets:
None
Giulini, M; Cutting, D; Deane, C; Desai, N; Schneider, C; Bonvin, AMJJ. 2025. "HADDOCK docking antibody-antigen models using machine learning-predicted unbound structures.", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/1139.
Antibody-antigen models for the paper "Towards the accurate modelling of antibody-antigen complexes from sequence using machine learning and information-driven docking". M Giulini, C Schneider, D Cutting, N Desai, C Deane, AMJJ Bonvin. Bioinformatics. 2024
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Marco Giulini | Data Collector, Depositor | Utrecht University |
| Daniel Cutting | Data Collector | Exscientia plc, The Schroedinger Building, OX4 4GE, Oxford, UK |
| Charlotte Deane | Data Collector | Exscientia plc, The Schroedinger Building, OX4 4GE, Oxford, UK |
| Nikita Desai | Data Collector | Exscientia plc, The Schroedinger Building, OX4 4GE, Oxford, UK |
| Constantin Schneider | Data Collector | Exscientia plc, The Schroedinger Building, OX4 4GE, Oxford, UK |
| Alexandre MJJ Bonvin | Data Collector, PI | Utrecht University |
none
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.