Data DOI: 10.15785/SBGRID/1001 | ID: 1001
7QOQ Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: 24 Feb 2023
1. If this dataset is locally available, it should be accessable at /programs/datagrid/1001
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/1001 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/1001 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/1001 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/1001 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 1001 ; shasum -c files.sha'
Storage requirements: 2.4G
Biological Sample:
Mycobacterial glucosyl-3-phosphoglycerate synthase
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
ESRF ID23-2
Data Creation Date:
14 Feb 2014
Related Datasets:
None
Pereira, PJB. 2023. "X-Ray Diffraction data for: Mycobacterial glucosyl-3-phosphoglycerate synthase. PDB Code 7QOQ", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/1001.
X-Ray Diffraction data from M. hassiacum GpgS, source of 7QOQ structure
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro JB Pereira | Data Collector, Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.8729
Sweep:
SWEEP1
Files:
/programs/datagrid/1001/bi1496_w1_2_####.cbf
Images:
1 - 1000
Beam:
(140.18, 139.04) -> (140.18, 138.59)
Distance:
227.44 -> 229.22
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.91 | 5.16 | 1.91 |
| Low resolution limit | 21.93 | 21.93 | 1.94 |
| Completeness | 100.0 | 100.0 | 100.0 |
| Multiplicity | 5.2 | 4.8 | 5.2 |
| I/sigma | 5.6 | 14.4 | 0.9 |
| Rmerge | 0.192 | 0.072 | 1.638 |
| CC half | 0.988 | 0.99 | 0.315 |
| Anomalous completeness | 98.0 | 97.0 | 98.3 |
| Anomalous multiplicity | 2.8 | 2.8 | 2.8 |
| Cell | 70.98 | 90.4 | 95.96 | 90.0 | 90.0 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.8729
Sweep:
SWEEP1
Files:
/programs/datagrid/1001/bi1496_w1_2_####.cbf
Images:
1 - 1000
Beam:
(140.18, 139.04) -> (140.18, 138.65)
Distance:
227.44 -> 222.39
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.04 | 5.54 | 2.04 |
| Low resolution limit | 57.08 | 57.1 | 2.08 |
| Completeness | 96.4 | 92.3 | 98.1 |
| Multiplicity | 2.8 | 2.7 | 2.8 |
| I/sigma | 5.3 | 14.2 | 1.2 |
| Rmerge | 0.136 | 0.045 | 0.805 |
| CC half | 0.971 | 0.98 | 0.354 |
| Anomalous completeness | 80.2 | 75.9 | 84.9 |
| Anomalous multiplicity | 1.5 | 1.5 | 1.5 |
| Cell | 71.03 | 90.42 | 96.02 | 90.0 | 90.05 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.8729
Sweep:
SWEEP1
Files:
/programs/datagrid/1001/bi1496_w1_2_####.cbf
Images:
1 - 1000
Beam:
(140.18, 139.04) -> (140.18, 138.72)
Distance:
227.44 -> 215.7
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 2.64 | 7.15 | 2.64 |
| Low resolution limit | 67.37 | 67.39 | 2.68 |
| Completeness | 96.0 | 95.6 | 68.8 |
| Multiplicity | 2.9 | 3.1 | 2.8 |
| I/sigma | 4.0 | 14.4 | 1.2 |
| Rmerge | 0.428 | 0.2 | 0.921 |
| CC half | 0.735 | 0.892 | 0.348 |
| Anomalous completeness | 84.0 | 91.9 | 59.5 |
| Anomalous multiplicity | 1.6 | 1.6 | 1.6 |
| Cell | 67.499 | 88.903 | 91.984 | 90.0 | 93.542 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
