Data DOI: 10.15785/SBGRID/1000 | ID: 1000
7PHO Coordinates: Viewer, PDB (RCSB) (PDBe), MMDB
Pereira Laboratory, IBMC/i3S, Universidade do Porto
Release Date: 24 Feb 2023
1. If this dataset is locally available, it should be accessable at /programs/datagrid/1000
2. To download this dataset, please run the following command from your Terminal on a Linux or OS X workstation:
'rsync -av rsync://data.sbgrid.org/10.15785/SBGRID/1000 .' (Harvard Medical School, USA)
Depending on your location, faster access may be available from a Tier 1 site closer to your location
'rsync -av rsync://sbgrid.icm.uu.se/10.15785/SBGRID/1000 .' (Uppsala University, Sweden)
'rsync -av rsync://sbgrid.pasteur.edu.uy/10.15785/SBGRID/1000 .' (Institut Pasteur de Montevideo, Uruguay)
'rsync -av rsync://sbgrid.ncpss.org/10.15785/SBGRID/1000 .' (Shanghai Institutes for Biological Sciences, China)
3. After the transfer is completed, please issue the following command to verify data integrity:
'cd 1000 ; shasum -c files.sha'
Storage requirements: 5.9G
Biological Sample:
Mycobacterial glucosyl-3-phosphoglycerate synthase
Dataset Type:
X-Ray Diffraction
Subject Composition:
Ligand, Protein
Collection Facility:
ALBA-CELLS BL13-XALOC
Data Creation Date:
24 Sep 2019
Related Datasets:
None
Pereira, PJB. 2023. "X-Ray Diffraction data for: Mycobacterial glucosyl-3-phosphoglycerate synthase. PDB Code 7PHO", SBGrid Data Bank, V1, https://doi.org/10.15785/SBGRID/1000.
X-Ray Diffraction data from M. hassiacum GpgS, source of 7PHO structure
| Name | Additional Roles | Affiliation While Working on the Project |
|---|---|---|
| Pedro JB Pereira | Data Collector, Depositor | IBMC - Instituto de Biologia Molecular e Celular |
| Pedro Pereira | PI | Universidade do Porto |
none
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97926
Sweep:
SWEEP1
Files:
/programs/datagrid/1000/B8X15_2_####.cbf
Images:
1 - 1000
Beam:
(220.06, 212.65) -> (220.06, 212.19)
Distance:
216.55 -> 215.58
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.25 | 3.39 | 1.25 |
| Low resolution limit | 65.65 | 65.74 | 1.27 |
| Completeness | 98.8 | 96.0 | 95.6 |
| Multiplicity | 2.8 | 2.8 | 2.3 |
| I/sigma | 11.9 | 41.9 | 0.8 |
| Rmerge | 0.028 | 0.015 | 0.965 |
| CC half | 0.999 | 0.999 | 0.328 |
| Anomalous completeness | 85.2 | 81.1 | 64.9 |
| Anomalous multiplicity | 1.5 | 1.5 | 1.5 |
| Cell | 70.53 | 95.33 | 90.53 | 90.0 | 90.01 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97926
Sweep:
SWEEP1
Files:
/programs/datagrid/1000/B8X15_2_####.cbf
Images:
1 - 1000
Beam:
(220.06, 212.65) -> (220.06, 212.18)
Distance:
216.55 -> 215.46
Spacegroup:
P 1 21 1
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.24 | 3.37 | 1.24 |
| Low resolution limit | 65.63 | 65.72 | 1.26 |
| Completeness | 98.1 | 97.2 | 82.5 |
| Multiplicity | 2.7 | 2.8 | 2.3 |
| I/sigma | 12.5 | 46.1 | 0.7 |
| Rmerge | 0.027 | 0.013 | 1.053 |
| CC half | 0.999 | 0.999 | 0.316 |
| Anomalous completeness | 82.2 | 80.8 | 58.6 |
| Anomalous multiplicity | 1.5 | 1.5 | 1.5 |
| Cell | 70.52 | 90.51 | 95.31 | 90.0 | 90.06 | 90.0 |
|---|
Version:
version unreported
Project:
AUTOMATIC
Crystal:
DEFAULT
Sequence Length:
0
Wavelength:
SAD - 0.97926
Sweep:
SWEEP1
Files:
/programs/datagrid/1000/B8X15_2_####.cbf
Images:
1 - 1000
Beam:
(220.06, 212.65) -> (220.06, 212.19)
Distance:
216.55 -> 215.75
Spacegroup:
P 21 21 21
For AUTOMATIC/DEFAULT/SAD:
| ALL | LOW | HIGH | |
|---|---|---|---|
| High resolution limit | 1.17 | 3.18 | 1.17 |
| Low resolution limit | 65.65 | 65.75 | 1.19 |
| Completeness | 98.4 | 100.0 | 82.4 |
| Multiplicity | 4.9 | 5.5 | 2.4 |
| I/sigma | 12.8 | 91.2 | 0.2 |
| Rmerge | 0.045 | 0.019 | 1.251 |
| CC half | 0.999 | 0.999 | 0.291 |
| Anomalous completeness | 92.8 | 98.9 | 49.6 |
| Anomalous multiplicity | 2.6 | 2.6 | 2.6 |
| Cell | 70.522 | 90.53 | 95.338 | 90.0 | 90.0 | 90.0 |
|---|
License: CC0
Terms: Our Community Norms as well as good scientific practices expect that proper credit is given via citation. Please use the data citation, as generated by the SBGrid Data Bank.
